fasta
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ECS 124 - Theory and Practice of Bioinformatics
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Sep 9, 2018 - Perl
Bioinformatics
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Nov 1, 2022 - Python
Merge a list of functional annotations with a fasta file of sequences
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Aug 16, 2020 - Python
A short script for searching in Uniprot using RESTful APIs
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Dec 17, 2021 - R
Create required reference genome index files for WGS data analysis
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Aug 3, 2023 - Nextflow
An easy fragment of code to read in fasta format files
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Aug 19, 2022 - Jupyter Notebook
Program to generate RAxML sliding window trees
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Jan 1, 2023 - Python
Substitute codons by those that are the most frequent in a specific organism
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Aug 19, 2021 - Python
Python Tools for Computational Molecular Biology
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Jan 31, 2019 - Jupyter Notebook
Basic seed-and-extend DNA sequence read aligner
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Jul 12, 2018 - C++
StretchFinder is a tool that helps to analyze the codon composition in genomes. It has the basic pipelines needed in order to draw preliminary conclusions about the codon usage and composition of genomes.
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Sep 16, 2020 - HTML
perform interval queries on an indexed fasta file
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Aug 23, 2023 - Rust
CaMELS: In silico prediction of calmodulin binding proteins and their binding sites
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Nov 1, 2018 - Python
Using Python to locate a peptide sequence to a reference protein and PTM site
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Aug 21, 2019 - Python
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