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RawHash is the first mechanism that can accurately and efficiently map raw nanopore signals to large reference genomes (e.g., a human reference genome) in real-time without using powerful computational resources (e.g., GPUs). Described by Firtina et al. (published at https://academic.oup.com/bioinformatics/article/39/Supplement_1/i297/7210440)
Escape if you can! A radiological event has occurred and you have to find your way out. Pick up items along the way that may help or harm you. When you've accumulate too much radiation it's game over.
DecontaMiner is a tool designed and developed to investigate the presence of contaminating sequences in unmapped NGS data. It can suggest the presence of contaminating organisms in sequenced samples, that might derive either from laboratory contamination or from their biological source, and in both cases can be considered as worthy of further in…
[IEEE ICASSP 2023] "Robust Subspace Tracking with Contamination Mitigation via Alpha-Divergence". In 48th IEEE International Conference on Acoustics, Speech, & Signal Processing, 2023.