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cell-fate-transitions

Here are 4 public repositories matching this topic...

cellrank

theislab / cellrank

CellRank: dynamics from multi-view single-cell data

data-science machine-learning bioinformatics genetics trajectory-generation markov-chains manifold-learning single-cell-genomics single-cell-rna-seq cell-fate-transitions fuzzy-clustering-analyses rna-velocity cell-fate-determination

Updated Apr 23, 2024
Python

dpeerlab / Palantir

Single cell trajectory detection

markov-chain dimensionality-reduction scrna-seq trajectory-generation diffusion-maps differentiation manifold-learning single-cell-genomics cell-fate-transitions scrna-seq-analysis

Updated Apr 22, 2024
Jupyter Notebook

edroaldo / cellrouter

Reconstruction of complex single-cell trajectories using CellRouter

scrna-seq trajectory-analysis stem-cell-differentiation cell-fate-transitions

Updated Dec 14, 2018
R

ManuSetty / Palantir

Single cell trajectory detection

machine-learning entropy dimensionality-reduction scrna-seq trajectory-generation diffusion-maps differentiation manifold-learning manifold-learing single-cell-genomics single-cell-rna-seq single-cell-analysis cell-fate-transitions

Updated Aug 21, 2018
Jupyter Notebook

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