Preprocessing pipeline on Brain MR Images through FSL and ANTs, including registration, skull-stripping, bias field correction, enhancement and segmentation.
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Updated
May 15, 2018 - Python
Preprocessing pipeline on Brain MR Images through FSL and ANTs, including registration, skull-stripping, bias field correction, enhancement and segmentation.
Macaca Mulatta brain tissue segmentation project with prof. Martin Styner.
Fast Whole Brain Segmentation (Layers, codes and Pre-trained Models)
This repository contains the code of HyperDenseNet, a hyper-densely connected CNN to segment medical images in multi-modal image scenarios.
This repository contains the code of LiviaNET, a 3D fully convolutional neural network that was employed in our work: "3D fully convolutional networks for subcortical segmentation in MRI: A large-scale study"
Deep learning based skull stripping and FLAIR abnormality segmentation in brain MRI using U-Net
3D Multi-modal (FLAIR and T1) Brain MRI Scan Segmentation using Generative Adversarial Learning
AICONSlab's ventricular segmentation technique using CNNs
Brain white matter hyperintensity segmentation, with T1 and FLAIR MRI images, using UNet.
Radiological-anatomical distribution patterns of Jakob-Creutzfeldt disease in relation to functional cortical systems
This project shows a simple way to segment a brain MRI image
Brain Segmentation
unet brain segmentation with pytorch c++
This repository contrains source code and the report for the Brain Segmentation challenge. It was the final assignment for the Medical Image Segmentation and Analysis course at the University of Girona for the MAIA programme.
AssemblyNet: 3D Whole Brain MRI segmentation pipeline
Fully automatic brain tumour segmentation using Deep 3-D convolutional neural networks
[MICCAI'23] "Learning Ontology-Based Hierarchical Structural Relationship for Whole Brain Segmentation".
Code for DARTS: DenseUnet-based Automatic Rapid Tool for brain Segmentation
The project is used to do preprocessing on brain MR images by using Nipype.
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