An NLP pipeline for annotating ontologies from biomedical corpora
-
Updated
Jun 27, 2017 - Perl
An NLP pipeline for annotating ontologies from biomedical corpora
A comprehensive atlas of ML/NLP Tools/Models/Data/Research in Medical/Clinical Domain
This code is to run MetaMap in parallel using Python.
Attention-based approach to NIL Entity Linking
Navigating My Reference Manager
This repository automatically requests and extracts abstract from PubMed.
Implementation of Deep Divergence Event Graph Kernels
NLP Named Entity Recognition dalam bidang Biomedis, mendeteksi teks dan membuat klasifikasi apakah teks tersebut mempunyai entitas plant atau disease, memberi label pada teks, menguji hubungan entitas plant dan disease, menilai kecocokan antara kedua entitas, membandingkan hasil uji dengan menggunakan models BERT-BILSTM-CRF
[COLING22] Text-to-Text Extraction and Verbalization of Biomedical Event Graphs
Unsupervised Discovery Of Trends In Biomedical Research Based On The PubMed Baseline Repository
Framework to study the use of deep active learning for biomedical relation extraction
NLP Named Entity Recognition dalam bidang Biomedis, mendeteksi teks dan membuat klasifikasi apakah teks tersebut mempunyai entitas plant atau disease, memberi label pada teks, menguji hubungan entitas plant dan disease, menilai kecocokan antara kedua entitas, membandingkan hasil uji dengan menggunakan models BERT
Named Entity Recognition using BERT
Bio-Electra - Small and efficient discriminatively pre-trained language representation models for biomedical text mining
👑🦠 Annotating PMC and PubMed articles for Covid-related entities
How Do Your Biomedical Named Entity Recognition Models Generalize to Novel Entities?
Evaluation scripts of the Biocreative LitCovid track
A hybrid approach toward biomedical relation extraction training corpora: combining distant supervision with crowdsourcing
PipelineIE is a project that contains a pipeline for information extraction (currently triple) from free text and domain specific text (eg. biomedical domain) and also supports custom models making it flexible to support other domains. It takes care of coreference resolution and entity resolution by also allowing to test with different tools.
K-RET: Knowledgeable Biomedical Relation Extraction System
Add a description, image, and links to the biomedical-text-mining topic page so that developers can more easily learn about it.
To associate your repository with the biomedical-text-mining topic, visit your repo's landing page and select "manage topics."