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b-cell-receptor

Here are 9 public repositories matching this topic...

immunomind / immunarch

🧬 Immunarch: an R Package for Fast and Painless Exploration of Single-cell and Bulk T-cell/Antibody Immune Repertoires

Updated Apr 9, 2024
R

awesome-vdj

slowkow / awesome-vdj

📚 Tools and databases for analyzing HLA and VDJ genes.

bioinformatics awesome-list immunology antibody t-cell-receptor tcr hla hla-database hla-typing bcr b-cell-receptor vdj

Updated May 9, 2024

jianqingzheng / XBCR-net

Code for "Deep learning-based rapid generation of broadly reactive antibodies against SARS-CoV-2 and its Omicron variant" (Cell Research)

deep-learning tensorflow keras-tensorflow b-cell-receptor antibody-sequence

Updated Apr 19, 2024
Python

IgGeneUsage

snaketron / IgGeneUsage

Comparison of gene usage in immune repertoires under different biological conditions

immunology high-throughput-sequencing immunoglobulin differential-gene-expression immunoinformatics differential-analysis vdj-recombination tcr-repertoire immune-repertoires immunological-bioinformatics immunogenomics immune-repertoire bcr-repertoire immune-repertoire-analysis b-cell-receptor

Updated Apr 20, 2024
R

Magnushhoie / discotope3_web

DiscoTope-3.0: Improved B-cell epitope prediction using AlphaFold2 modeling and inverse folding latent representations

epitopes-prediction b-cell-receptor epitopes

Updated Sep 18, 2023
Python

snaketron / ClustIRR

Clustering of immune receptor repertoires

bioinformatics clustering immunology t-cell-receptor rep-seq immunoinformatics quantitative-methods b-cell-receptor repertoire-analysis

Updated Apr 17, 2024
R

tAndreani / scBCR

Benchmarking computational methods for B cell receptor reconstruction from single cell RNA-seq data

benchmark antibodies single-cell-rna-seq personalized-medicine b-cell-receptor

Updated Nov 18, 2022
R

snaketron / IgStats

Suit of statistical procedures for robust quantification of various BCR and TCR repertoire properties

immunology t-cell-receptor immunoinformatics immunological-bioinformatics immune-repertoire immune-repertoire-analysis b-cell-receptor immune-rep

Updated Jan 26, 2020
R

swanson-lab / VH12-Sequencing

Code and scripts used for Worth et al. 2022: "Receptor editing constrains development of phosphatidyl choline-specific B cells in VH12-transgenic mice".

r ngs immunology rep-seq ngs-analysis vdj-recombination ngs-pipeline b-cell immcantation transgene b-cell-receptor mus-musculus

Updated May 24, 2022
R

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