Foldseek enables fast and sensitive comparisons of large structure sets.
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Updated
May 23, 2024 - C
Foldseek enables fast and sensitive comparisons of large structure sets.
⛏ HLA predictions from NGS shotgun data
create Font Awesome Dashboard for CSS assignment...
genome and transcriptome fraction fetch post alignment.
graphanalyzer python package for dealing with paf and gfa alignments.
Set of scripts to process HybSeq target enrichment HTS data (on computing grids).
This repository streamlines the conversion of raw DNA sequencing data from FASTQ to BAM format, incorporating scripts that not only facilitate BAM conversion but also generate Sequence Alignment Map (SAM) files.
dna/rna alignment classifier
Genome read alignments visualizer
Fiji / ImageJ plugin for Imaging Alignment. This plugin manages two types of alignment: Manual Alignment and Automatic Alignment.
SeqMerger is designed to concatenate sequences from multiple aligned FASTA files.
Homework Solutions for Introduction to Bioinformatics Course as Computer Science B.Sc. Student at Department of Computer Engineering, Sharif University of Technology
STRAC (Scalable Trace Comparison) http://arxiv.org/pdf/1910.03478
Software tools to collect Coronavirus sequences and create protein and nucleotide HMMs
Calculate taxon-specific alignment statistics from a collection of UCE alignments
⛰ covtobed | Convert the coverage track from a BAM file into a BED file
Jupiter Bioinformatics (V2) uses the local sequence alignment algorithm and a few stored experiments for further experimentation on sequence alignment. It is an open source application designed in native JavaScript, that is able to align two sequences/texts in order to match the regions that are similar.
The effects of word segmentation quality on word alignments.
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