- Ensure Python 3.9+ is installed and clone the repository
- Run
pip install -r requirements.txt
- Get x3dna-dssr and update
X3DNA_PATH
inrun_rnascape.py
- Run
run_rnascape.py <FILEPATH> <PREFIX>
(ex:python run_rnascape.py 1ivs.cif 1ivs
) - Edit
run_rnascape.py
to change base pair annotation, rotation, and other features - Default output is in
./output/processed_images/
-
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Geometry faithful 2D RNA visualization
timkartar/RNAscape
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Geometry faithful 2D RNA visualization
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