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43 Open 48 Closed
43 Open 48 Closed
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Issues list

DNAmer not defined
#148 opened Mar 19, 2024 by Matthew47work
2
Is Whippet adapted for long reads?
#147 opened Mar 14, 2024 by Oliverfeudj
1
Regarding ArgumentError: cannot create a mer with ambiguous nucleotides
#144 opened Nov 17, 2023 by PRIYANKA-22091995
1
ERROR: expected package WaveletMatrices [c0580c95] to be registered when compiling
#142 opened Oct 11, 2023 by noahpieta
2
ERROR: LoadError: BoundsError: attempt to access BioSequences.LongDNASeq at index [65269405:65269446]
#141 opened Jun 26, 2023 by dschwoerer
1
Missing dependencies for Julia
#138 opened Nov 2, 2022 by astrophys
5
How whippet is listing alternative events?
#137 opened Sep 29, 2022 by pierreg2
2
Any idea to generate VCF/VEP files from Whippet output files?
#131 opened Jun 1, 2022 by ptnaimelmm
1
How to interpret complexity column in the .psi.gz output files?
#130 opened Feb 16, 2022 by MorticiaGiulia
1
Optimal value for --bam-min-reads parameter
#126 opened Oct 8, 2021 by narges-s
1
Probability for deltaPsi
#122 opened Jul 28, 2021 by OlgaVT
2
bam index file in .csi format
#120 opened May 31, 2021 by akshaya-v
2
Error during quantification of FASTQ files
#118 opened May 6, 2021 by dBenedek
12
--biascorrect specific error: LoadError: BoundsError: attempt to access 32nt DNA Sequence:
#114 opened Mar 6, 2021 by rfara
4
Option for reverse strand-specific data in bin/whippet-index.jl
#108 opened Jan 18, 2021 by areyesq89
how does whippet define exon skip events?
#107 opened Nov 6, 2020 by mhjiang97
4
Generate "sam | bam" files from the quantification step
#106 opened Sep 30, 2020 by JamalEH
support for fasta files or bam files as input in whippet-quant?
#105 opened Sep 10, 2020 by wbvguo
Splice junctions strandedness
#103 opened Jul 6, 2020 by PeterVenhuizen
1
Is it normal to have different number of events for different samples with same index.jls?
#102 opened Jun 17, 2020 by josegarciamanteiga
2
LoadError: InexactError() with single end
#100 opened Jun 2, 2020 by LucoLab
Feature Request: Variable boundaries like SUPPA
#99 opened Apr 3, 2020 by Alex-Nesta
3
Quantification after creating an index supplemented with bam files produces NAs in evens of interest
#98 opened Mar 19, 2020 by sopenaml
3
MA-like plot
#97 opened Feb 24, 2020 by JamalEH
Question regarding relative proportion of TE events human transcriptome
#96 opened Feb 17, 2020 by JamalEH
10
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