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updated readme
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kwaco committed Nov 16, 2015
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Expand Up @@ -163,7 +163,7 @@ These are resources that require login credentials to access secure data, so we

**Put these tables in the $CLINER_DIR/umls_tables directory.**

In order to tell CliNER that the tables are there, you must edit the file "$CLINER_DIR/config.txt" and change the line saying "UMLS None" to "UMLS True". This command will do that ``sed -i "s/UMLS None/UMLS True/g" $CLINER_DIR/config.txt``
In order to tell CliNER that the tables are there, you must edit the file "$CLINER_DIR/config.txt" and change the line saying "UMLS None" to "UMLS <path to dir containing tables>". This command will do that ``sed -i "s/UMLS None/UMLS example/umls_tables_dir/g" $CLINER_DIR/config.txt``

**The database will be built from the tables when CliNER is run for the first time.**

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