NEWS and release tag

umxSummary path type are breviated

NEWS.md

@@ -1,11 +1,16 @@
-## dev umx 4.8.0
+## dev umx 4.9.0
+* NEW: 
+
+# Releases
+## umx 4.8.0
+* June 2021 R 4.1.0 (2021-06-01)
 * NEW: `umxPlot` now detects and plots Pearson-Aitken selection paths (solid red headless).
-* NEW: `umxPlotFun` plot functions, e.g "sin(x)", "cos(x)" without hassles.
+* NEW: `umxPlotFun` plot functions without hassles. e.g `umxPlotFun("sin(x)")`
 * NEW: `umxModelNames` to get model and submodel names from a model.
 * NEW: `libs` as a short cut for `multiple library()` calls
   * e.g. `libs("x", "y", c("a", "b"))`
 * NEW: `fin_valuation` uses revenue, margin, expenses and PE to compute a market cap.
-  * IMPROVED: `fin_interest` shorter parameter name `dinflate` and other improvements.
+* IMPROVED: `fin_interest` shorter parameter name `dinflate` and other improvements.
 * IMPROVED: `umxACEv` Tables now include markdown-compatible table captions.
 * IMPROVED: `umxAPA` reports R^2 for `lm` (in addition to beta & CI[] for each parameter)
 * IMPROVED: `umxSummary` sorts RAM parameters by type (factor loading etc.) and can filter means and residuals for ease of use.
@@ -14,31 +19,30 @@
 * IMPROVED: `umxCompare` Maintain compatibility with new OpenMx changes to `mxCompare` (esp. for WLS).
 * IMPROVED: `umx_read_lower` accept names for lower diag.
 * IMPROVED: `umxCP` `correlatedACE` leaves the covariances fixed@0.
-* IMPROVED: `umxAPA` pretty printing.
 * IMPROVED: `umxACE` added `A_std` closes #151
+* IMPROVED: `umxAPA` pretty printing.
 * IMPROVED: `umxPlotFun` check for character input.
 * NEW: `xmu_summary_RAM_group_parameters` sort and filter RAM model parameters for ease of understanding.
 * MINOR: `umxFactor` now used in all examples involving factor making.
 
-# Releases
 ## umx 4.3.0
 * January 2021 R 4.0.3 (2020-10-10)
 * NEW `plot` can output to pdf, png, svg!
-* NEW `umx_set_plot_format` can choose between pdf, png, svg plot output (in addition to DiagrammeR and graphviz)
+* NEW `umx_set_plot_format` adds pdf, png, svg plot output (in addition to DiagrammeR and graphviz)
+* NEW: `umx_lower.tri` helper to get lower.tri values in 1 call
+* NEW: `umx_set_plot_use_hrbrthemes` control
+* NEW: `plot.percent` plot support for percent change questions
 * IMPROVED: `umxSummary` now reports algebra values when present in RAM models closes #70
 * IMPROVED: `umxSummary` tables have pandoc captions (see #145)
 * IMPROVED: `umxCompare` table output and plain-English summary printing (cat)
 * IMPROVED: `umxCP` practical workflows for correlated ACE
-* NEW: `umx_lower.tri` helper to get lower.tri values in 1 call
-* HELP: `umxCP` Document that correlatedA works on a, c and e, allowing factors built by these matrices to correlate.
+* IMPROVED: `fin_compound_interest` now outputs a table of annual returns
+* IMPROVED: `umxAPA` uses cat to improve usability of summary data
+* HELP: `umxCP` Document that correlatedA works on a, c and e, allowing factors to correlate.
 * BETA: `umxGxEbiv` lboundACE @ 0 by default
 * FIXED: `umxSimplex` example
 * FIXED: `umxGxEbiv` fix nonfunctional lboundACE and lboundM (thanks @mcneale)
-* FIXED: `umxGxEbiv` selVars order was imposed on expectation dimnames but didn't match the cov matrix due to bespoke nature of expCov algebras...
-* IMPROVED: `fin_compound_interest` now outputs a table of annual returns
-* IMPROVED: `umxAPA` uses cat to improve usability of summary data
-* NEW: `umx_set_plot_use_hrbrthemes` control
-* NEW: `plot.percent` plot support for percent change questions
+* FIXED: `umxGxEbiv` selVars order was imposed on expectation dimnames but didn't match the cov matrix due to bespoke nature of `expCov` algebras...
 
 ## umx 4.2.5
 * December 2020 R 4.0.3 (2020-10-10)

R/build_run_modify.R

@@ -22,6 +22,9 @@
 
 # ![](example-plot.jpg "Example Plot Title") = Image in man/figures
 
+# cran_prep <- check_for_cran("~/bin/umx/", show_status=FALSE)
+# cran_prep$cran_summary()
+
 # Makevars for clang
 # 	mate ~/.R/Makevars
 # 	https://gist.github.com/tbates/9cec0a93e04c06c41b550454eaa892a3
@@ -4014,8 +4017,7 @@ umxFixAll <- function(model, name = "_fixed", run = FALSE, verbose= FALSE){
 #' 
 #' # Example of a warning to not omit the variable names
 #' # tmp = umxThresholdMatrix(x)
-#' # Polite message: For coding safety, when calling umxThresholdMatrix, set fullVarNames to the list of FULL names of all
-#' #  the variables in the model (AND you MUST include sep if this is a twin model!!)
+#' # Polite message: For coding safety, when calling umxThresholdMatrix, set fullVarNames...
 #' 
 #' # One ordered factor with 5-levels
 #' x = cut(rnorm(100), breaks = c(-Inf,.2,.5, .7, Inf)); levels(x) = 1:5
@@ -4089,7 +4091,8 @@ umxFixAll <- function(model, name = "_fixed", run = FALSE, verbose= FALSE){
 #' # = Example with method = allFree =
 #' # =================================
 #'
-#' tmp = umxThresholdMatrix(twinData, fullVarNames = tvars(selDVs, sep= ""), sep = "", method = "allFree")
+#' tmp = umxThresholdMatrix(twinData, fullVarNames = tvars(selDVs, sep= ""), sep = "", 
+#' 	method = "allFree")
 #' all(tmp[[2]]$free)
 #' 
 umxThresholdMatrix <- function(df, fullVarNames = NULL, sep = NULL, method = c("Mehta", "allFree"), threshMatName = "threshMat", l_u_bound = c(NA, NA), droplevels = FALSE, verbose = FALSE, selDVs= "deprecated"){

R/xmu.R

@@ -1808,20 +1808,20 @@ xmu_summary_RAM_group_parameters <- function(model, paramTable,  means= FALSE, r
 					if(from == to){
 						paramTable[i, "type"] = "Factor Variances"
 					}else{
-						paramTable[i, "type"] = "Factor Covariances"
+						paramTable[i, "type"] = "Factor Covs"
 					}
 				}else{
-					paramTable[i, "type"] = "Latent-Manifest Covariances"
+					paramTable[i, "type"] = "Latent-Manifest Covs"
 				}
 			} else { # from %in% manifests
 				if(to %in% manifests){
 					if(from == to){
 						paramTable[i, "type"] = "Residuals"
 					}else{
-						paramTable[i, "type"] = "Manifest Covariances"						
+						paramTable[i, "type"] = "Manifest Covs"						
 					}
 				}else{
-					paramTable[i, "type"] = "Latent-Manifest Covariances"
+					paramTable[i, "type"] = "Latent-Manifest Covs"
 				}
 			}
 		} else if(location$matrix == "A"){