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Center for Statistical Genetics

The Center for Statistical Genetics at the University of Michigan School of Public Health

46 followers
Ann Arbor, MI
https://sph.umich.edu/csg/

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Popular repositories

pheweb pheweb Public

A tool to build a website to browse hundreds or thousands of GWAS.

Python 151 65
locuszoom locuszoom Public

A Javascript/d3 embeddable plugin for interactively visualizing statistical genetic data from customizable sources.

JavaScript 148 28
demuxlet demuxlet Public

Genetic multiplexing of barcoded single cell RNA-seq

C++ 111 24
SLURM-examples SLURM-examples Public

Python 85 28
bamUtil bamUtil Public

C++ 83 29
locuszoom-standalone locuszoom-standalone Public

Create regional association plots from GWAS or meta-analysis

Python 56 20

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Showing 10 of 107 repositories

terraform-aws-imputation-server Public
A set of Terraform Modules for deploying an imputation server on AWS

HCL 0 Apache-2.0 2 0 0 Updated Apr 26, 2024
hds-util Public

C++ 2 MPL-2.0 0 1 0 Updated Apr 22, 2024
cloudgene Public Forked from genepi/cloudgene
A framework to build Software As A Service (SaaS) platforms for data analysis pipelines.

Java 0 AGPL-3.0 18 0 0 Updated Apr 19, 2024
imputationserver Public Forked from genepi/imputationserver
TOPMED Imputation Server: A new web-based service for imputation that facilitates access to new reference panels and greatly improves user experience and productivity

Java 4 AGPL-3.0 38 0 0 Updated Apr 19, 2024
encore Public
Encore Analysis Server

Python 13 AGPL-3.0 6 0 4 Updated Apr 17, 2024
bravo_data_prep Public
Work flows and tools to create data that backs the BRAVO API.

C++ 0 MIT 2 6 0 Updated Mar 21, 2024
bravo_api Public
Server side data processing and retrieval endpoints for BRAVO

Python 1 MIT 2 16 0 Updated Mar 14, 2024
encore-client-r Public
An R package to interact with the Encore analysis server

R 2 0 0 0 Updated Feb 28, 2024
pheweb Public
A tool to build a website to browse hundreds or thousands of GWAS.

Python 151 MIT 65 31 1 Updated Feb 21, 2024
telomere-length-pipeline Public Forked from weinstockj/telomere-length-pipeline
A cloud-based pipeline to estimate telomere lengths from WGS data using Telseq

WDL 0 1 0 0 Updated Feb 18, 2024

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Top languages

C++ Python JavaScript Perl Java

Most used topics

gwas genetics gwas-summary-statistics gwas-tools locuszoom

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