This package facilitates batch feature extraction and data dashboarding of ABF files. Primarily written for Inoue Lab @ western university. The package is able to output feature arrays and/or raw current traces from the file(s). The module piggy backs off of some of the excellent work found in the pyABF & ipfx packages.
To install run
pip install git+https://github.com/smestern/pyAPisolation
To run simple analysis on your files. navigate to the /bin folder and run:
python run_APisolation.py
This will prompt you to select your files for analysis. The script will create an output folder for your traces.
To run simple analysis with gui on your files. navigate to the /bin folder and run:
python run_APisolation_GUI.py
//todo