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Yellow-bellied marmot (Marmota flaviventris)

https://en.wikipedia.org/wiki/Yellow-bellied_marmot

Sequencing data

  • PRJNA491472
  • SAMN10078668
  • SRP161939
  • SRS3791272
  • SRX4705503
  • SRR7878800

/projects/sjones_prj/CGEN150/Yellow_Bellied_Marmot/fastqs/

Genome assembly

/projects/sjones_prj/CGEN150/Yellow_Bellied_Marmot/YB_Marmot_120918/YB_min1000_160918.fasta

GenomeScope

GenomeScope report k=128

len:26,081bp uniq:55% het:0.847% kcov:25.8 err:3.97% dup:1.43% k:128

Property Min Max
Heterozygosity 0.677307% 1.01583%
Genome Haploid Length 24,194 bp 26,081 bp
Genome Repeat Length 10,876 bp 11,725 bp
Genome Unique Length 13,318 bp 14,357 bp
Model Fit 59.0981% 61.4097%
Read Error Rate 3.96712% 3.96712%

MITOS Annotation

MITOS report