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@sheynkman-lab

Lab for Proteoform Systems Biology

At the Sheynkman Lab, we study disease-relevant protein forms, or “proteoforms”, by integrating cutting-edge analytical and computational approaches from genomi

Popular repositories

  1. Long-Read-Proteogenomics Long-Read-Proteogenomics Public template

    A workflow for enhanced protein isoform detection through integration of long-read RNA-seq and mass spectrometry-based proteomics.

    Python 37 15

  2. Long-Read-Proteogenomics-Analysis Long-Read-Proteogenomics-Analysis Public

    Jupyter Notebook 3 1

  3. splice-event-to-isoform-pipeline splice-event-to-isoform-pipeline Public

    Shay's splice event to isoform integration pipeline

    Python 3 1

  4. SQANTI3_protein SQANTI3_protein Public

    Forked from ConesaLab/SQANTI3

    Repository of SQANTI3 tool for Quality Control of Long-Read Defined Transcriptomes

    Python 1

  5. LIME LIME Public

    Python 1 1

  6. Alternative-Proteome-Detection-Project Alternative-Proteome-Detection-Project Public

    Python 1

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