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Acoustic Glider Analysis Tools and Environment

Last Update: 25 May 2023

A collection of MATLAB-based tools to be used for piloting acoustic gliders, processing glider positional and environmental data, and analyzing glider-collected acoustic data for surveys of marine mammals.

This package is very much under development, but my hope is that I will maintain a stable release and then for those interested in the latest functionality, the repository can be cloned. For those interested in contributing to the package, I suggest creating a fork and using pull requests to contribute.

This code was either developed or most recently updated and tested with MATLAB version 2022b, but has undergone some testing with 2020b.

Detailed documentation and information on dependencies can be found at sfregosi.github.io/agate-public (the documentation is also under construction and I welcome any and all feedback!)

Background

These tools were initially developed for use with passive acoustic glider surveys conducted by the OSU/NOAA CIMERS Bioacoustics Lab bioacoustics.us and as part of my PhD. Initial development was for surveys using Seaglider platforms and either the Wideband Intelligent Signal Processor and Recorder (WISPR) or PMAR-XL recording systems.

Through NOAA’s Uncrewed Systems Initiative (UxS) we received funding to develop and improve these tools into a more broadly applicable and user-friendly tool box that could be used by all interested in conducting glider-based passive acoustic surveys for marine mammals.

Please contact me if you have any questions, feedback, or suggestions!

selene [dot] fregosi [at] noaa.gov or Report an issue on GitHub

Disclaimer

The scientific results and conclusions, as well as any views or opinions expressed herein, are those of the author(s) and do not necessarily reflect the views of NOAA or the Department of Commerce.

This repository is a scientific product and is not official communication of the National Oceanic and Atmospheric Administration, or the United States Department of Commerce. All NOAA GitHub project code is provided on an ‘as is’ basis and the user assumes responsibility for its use. Any claims against the Department of Commerce or Department of Commerce bureaus stemming from the use of this GitHub project will be governed by all applicable Federal law. Any reference to specific commercial products, processes, or services by service mark, trademark, manufacturer, or otherwise, does not constitute or imply their endorsement, recommendation or favoring by the Department of Commerce. The Department of Commerce seal and logo, or the seal and logo of a DOC bureau, shall not be used in any manner to imply endorsement of any commercial product or activity by DOC or the United States Government.

Software code created by U.S. Government employees is not subject to copyright in the United States (17 U.S.C. §105). The United States/Department of Commerce reserves all rights to seek and obtain copyright protection in countries other than the United States for Software authored in its entirety by the Department of Commerce. To this end, the Department of Commerce hereby grants to Recipient a royalty-free, nonexclusive license to use, copy, and create derivative works of the Software outside of the United States.