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@seqcode

seqcode

Collection of projects related to DNA sequencing data processing & regulatory genomics analyses

Popular repositories

  1. miniMDS miniMDS Public

    Python 27 8

  2. allo allo Public

    Allo: a multi-mapped read rescue strategy for peak based gene regulatory analyses

    Python 12 1

  3. cross-species-domain-adaptation cross-species-domain-adaptation Public

    Codebase for the domain adaptation (cross-species TF binding prediction) project.

    Jupyter Notebook 11 6

  4. sequnwinder sequnwinder Public

    SeqUnwinder: a platform for deconvolving motifs associated with genomic labels

    Java 7

  5. chexmix chexmix Public

    ChExMix: the ChIP-exo mixture model

    Java 7

  6. seqcode-core seqcode-core Public

    SeqCode: Java code for the analysis of high-throughput sequencing data

    Java 6 4

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