2.4.3

🎉 Tractoflow 2.4.3 is ready 🎉

It's our latest release using nextflow DSL1
Next version will be using DSL 2 and will have a completely different organisation.

This new version uses also the latest version of scilpy 1.6.0

Highlight of this version:

• [ENH] GPU tracking 🥳
• [BF] Some BIDS improvement

Thanks @AlexVCaron and @CHrlS98

Arnaud

What's Changed

• Fix bc not supporting python scientific notation by @AlexVCaron in #82
• [WIP] BIDS fix by @arnaudbore in #75
• [BF] tractoflow fails if rev_b0 is 4D by @arnaudbore in #84
• [ENH] Nextflow version and nextflow work dir by @arnaudbore in #85
• [BF] Skip eddy wrong gradients by @arnaudbore in #86
• [ENH] update error message when rev_DWI and not cuda profile by @arnaudbore in #87
• [ENH] Add gpu local tracking by @arnaudbore in #80

New Contributors

• @AlexVCaron made their first contribution in #82

Full Changelog: 2.4.2...2.4.3

2.4.2

🥳 New tractoflow release 🥳

This release is compatible with scilus-1.5.0

What's Changed

• Update tractoflow - new container by @arnaudbore in #72

Full Changelog: 2.4.1...2.4.2

2.4.1

🎉 Quick fix for this release. 🎉

Now tractoflow is able to handle DWI acquisition with phase and mag parts.
Thank you @AlexVCaron

Arnaud

2.4.0

New tractoflow release !!

Thank you all for the good work especially 🔥 @AlexVCaron 🔥 and 🔥 @frheault 🔥

What's Changed

• [NF] Add profiles for specific usage by @arnaudbore in #59
• [WIP] Fix bundling by @arnaudbore in #61
• Extract shells by @arnaudbore in #60
• RF - skip bet_prelim_dwi if run_eddy is false by @gabknight in #68
• add remove invalid streamline after PFT and local tracking by @arnaudbore in #69
• Add possibility to have full AP-PA LR-RL data by @arnaudbore in #67

New Contributors

• @gabknight made their first contribution in #68

Full Changelog: 2.3.0...2.4.0

2.3.0

New Tractoflow release

⚠️ Compatible with scilpy>=1.3.0

What's Changed

• Add Atlas Based Segmentation (ABS) profile by @GuillaumeTh in #51
• Add option to compute dwi sh by @ppoulin91 in #41
• NF: Gibbs correction by @arnaudbore in #55
• HCP profile by @GuillaumeTh in #53
• Fix condition when only eddy by @arnaudbore in #56
• [NF] Compatible scilpy 1.3.0 by @arnaudbore in #57

New Contributors

• @ppoulin91 made their first contribution in #41

Full Changelog: 2.2.1...2.2.2

2.2.1

Bugs Fixed:

• participants_label
• FA Tracking
• Reproducibility

New features:

• Add cbrain profile - mode copy

2.2.1-rc5

BF - Reproducibility

2.2.1-rc4

BF Fix participant label

2.2.1-rc3

EHN: Add cbrain profile - mode copy

2.2.1-rc2

BF - FA Tracking