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[Module] Freesurfer registration #54

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@anroy1 anroy1 commented Jan 19, 2024

Describe your changes

Initial module PR for registration tool using Freesurfer synthmorph converting transform to ants orientation.

Say which test data are used by your module

Checklist before requesting a review

  • Create the tool:
    • Edit ./modules/nf-scil/<category>/<tool>/main.nf
    • Edit ./modules/nf-scil/<category>/<tool>/meta.yml
  • Generate the tests:
    • Edit ./tests/modules/nf-scil/<category>/<tool>/main.nf
    • Edit ./tests/modules/nf-scil/<category>/<tool>/nextflow.config
    • Add test data locally for tests with the fork repository
    • Generate the test infrastructure and md5sum for all outputs
  • Ensure the syntax is correct :
    • Check indentation abides with the rest of the library (don't hesitate to correct others !)
    • Lint everything. Ensure your variables have good names.

@AlexVCaron
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@nf-scil-bot fix linting

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@AlexVCaron
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@nf-scil-bot fix linting

@AlexVCaron AlexVCaron changed the title Registration Freesurfer registration Mar 7, 2024
@AlexVCaron AlexVCaron changed the title Freesurfer registration Add Freesurfer registration module Mar 7, 2024
@AlexVCaron AlexVCaron changed the title Add Freesurfer registration module [Module] Freesurfer registration Mar 7, 2024
@anroy1 anroy1 force-pushed the registration branch 2 times, most recently from 8148b67 to 00fc10f Compare April 9, 2024 19:22
@anroy1 anroy1 force-pushed the registration branch 2 times, most recently from 6c16d91 to ec7d848 Compare April 26, 2024 01:33
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2 participants