Update ecg.py #39
Update ecg.py #39
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Added Pan_Tompkins_Plus_Plus, an improved Pan-Tompkins algorithm
Added automatic beat correction algorithm
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| pks = [] | ||
| locs = peakutils.indexes(y=ecg_m, thres=0, min_dist=round(0.231*fs)) #Find all the peaks apart from previous peak 231ms, peak indices |
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Please confirm if this the PeakUtils package, so it can be added to the optional requirements for Biosppy :)
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Also don't forget to import the library at the beginning of the file!
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the peakutils is this one: https://peakutils.readthedocs.io/en/latest/. Sorry for the missing import
| th: float | ||
| Threshold. | ||
| ''' | ||
| df = pd.DataFrame({"signal": np.abs(x)}) |
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Biosppy currently does not support data frames. Would it be possible to change this function to use only numpy?
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maybe convert dataframe to numpy array using pandas.DataFrame.to_numpy?
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Hello Zihao, and thank you for your contribution! I suggested some changes that need to be addressed before testing the code with the rest of Biosppy. They are mainly related with imports and consistency with the rest of the library. Let me know if you agree with them!
Co-authored-by: Sofia Monteiro <81264130+sofia3ms@users.noreply.github.com>
Co-authored-by: Sofia Monteiro <81264130+sofia3ms@users.noreply.github.com>
Co-authored-by: Sofia Monteiro <81264130+sofia3ms@users.noreply.github.com>
Co-authored-by: Sofia Monteiro <81264130+sofia3ms@users.noreply.github.com>
Co-authored-by: Sofia Monteiro <81264130+sofia3ms@users.noreply.github.com>
Co-authored-by: Sofia Monteiro <81264130+sofia3ms@users.noreply.github.com>
Co-authored-by: Sofia Monteiro <81264130+sofia3ms@users.noreply.github.com>
Co-authored-by: Sofia Monteiro <81264130+sofia3ms@users.noreply.github.com>
Co-authored-by: Sofia Monteiro <81264130+sofia3ms@users.noreply.github.com>
Co-authored-by: Sofia Monteiro <81264130+sofia3ms@users.noreply.github.com>
Co-authored-by: Sofia Monteiro <81264130+sofia3ms@users.noreply.github.com>
Co-authored-by: Sofia Monteiro <81264130+sofia3ms@users.noreply.github.com>
Co-authored-by: Sofia Monteiro <81264130+sofia3ms@users.noreply.github.com>
Co-authored-by: Sofia Monteiro <81264130+sofia3ms@users.noreply.github.com>
Co-authored-by: Sofia Monteiro <81264130+sofia3ms@users.noreply.github.com>
Co-authored-by: Sofia Monteiro <81264130+sofia3ms@users.noreply.github.com>
Added Pan_Tompkins_Plus_Plus, an improved Pan-Tompkins algorithm