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PacBio Isoseq pipeline with specific steps to filter for single Captured gene

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sarahhp/pacbio2020

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ccs_aug20.json

ccs_aug20.json

 
 

ccs_check.json

ccs_check.json

 
 

cupcake.py

cupcake.py

 
 

dag.svg

dag.svg

 
 

filegraph.svg

filegraph.svg

 
 

get_fastq_sum.py

get_fastq_sum.py

 
 

iso-seq.json

iso-seq.json

 
 

iso-seq2.json

iso-seq2.json

 
 

minimap.py

minimap.py

 
 

minimap_update.py

minimap_update.py

 
 

polyA_filt.py

polyA_filt.py

 
 

reads_ccs.json

reads_ccs.json

 
 

run_tama.py

run_tama.py

 
 

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PacBio Isoseq pipeline with specific steps to filter for single Captured gene

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