Popular repositories

1. gps-pipeline gps-pipeline Public

   Nextflow Pipeline for processing Streptococcus pneumoniae sequencing raw reads (FASTQ files) by the GPS Project (Global Pneumococcal Sequencing Project)

   Nextflow 7 3

2. gps-visualiser gps-visualiser Public

   Summarisation of the findings in GPS (Global Pneumococcal Sequencing Project) country-specific analysis papers in a visual format.

   JavaScript 1

3. gps-database-processor gps-database-processor Public

   All-in-one tool to validate GPS (Global Pneumococcal Sequencing Project) database source files, generate inferred data, and export GPS Database Overview and Monocle compatible files

   Python 1

4. gps-database-overview gps-database-overview Public

   Visualisation of publicly available GPS (Global Pneumococcal Sequencing Project) data that can be accessed via Monocle.

   JavaScript 1

5. gps-project-website-react gps-project-website-react Public

   Rebuild of the GPS Project Website in React.js

   JavaScript 1

6. cps_extractor cps_extractor Public

   NextFlow pipeline which extracts capsular locus sequences (CPS) and checks for disruptive mutations

   Python 1 1