Popular repositories

1. Smart-seq3 Smart-seq3 Public

   Code and analysis pipeline for Smart-seq3 (Hagemann-Jensen et al. 2020).

   Python 49 12

2. txburst txburst Public

   Transcriptional burst kinetics inference and analysis described in the article "Genomic encoding of transcriptional burst kinetics" (Larsson et. al 2019).

   Jupyter Notebook 36 12

3. Spreading-Correction Spreading-Correction Public

   Supplementary information to "Computational correction of index switching in multiplexed sequencing libraries" (Larsson et. al 2018).

   Jupyter Notebook 15 4

4. dataprivacy dataprivacy Public

   Python 14 4

5. NASC-seq NASC-seq Public

   Code and analysis pipeline for NASC-seq.

   Python 11 2

6. lncRNAs_bursting lncRNAs_bursting Public

   Count tables, R Code and Analyses for Johnsson et al., 2021

   R 5 1