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The goal of the GitHub organization "Reproducible Reporting" is to facilitate good practices for scientific publication and the research behind it. By good practices, we mean at least the following:

  • Make it easier to reproduce and reuse research.
  • Increase the transparency of the writing process.
  • Automate otherwise error-prone processes.

This is facilitated by collecting the source material and the data in one Git repository per publication. The organization within each repository is streamlined as follows:

  1. The templates repository is a cookiecutter template, providing an initial configurable setup for a new publication repository.
  2. The Python packages StepUp Core and StepUp RepRep compile the publication source material into the final form for publication, presentation or journal submission. Their role is not limited to compiling LaTex sources. They also run post-processing scripts (e.g. using numpy, matplotlib), merge figures, archive datasets and keep track of dependencies between all these steps. StepUp makes it easy to tailor these workflows to the specific needs of any project.

Check out the documentation if you want to get started.

Pinned

  1. stepup-core stepup-core Public

    A simple, powerful and universal build tool

    Python 3 1

  2. stepup-reprep stepup-reprep Public

    StepUp RepRep is the StepUp extension for Reproducible Reporting

    Python 1 1

Repositories

Showing 9 of 9 repositories
  • stepup-reprep Public

    StepUp RepRep is the StepUp extension for Reproducible Reporting

    Python 1 GPL-3.0 1 5 0 Updated May 26, 2024
  • templates Public

    Configurable templates for Reproducible Reporting

    TeX 1 0 0 1 Updated May 26, 2024
  • stepup-core Public

    A simple, powerful and universal build tool

    Python 3 GPL-3.0 1 0 0 Updated May 26, 2024
  • dmp-emlp-md Public

    Data Management Plan for BOF project: "Groundbreaking models for spectroscopy and charge transport in molecular dynamics simulations"

    Python 0 0 0 0 Updated May 24, 2024
  • dmp-template Public

    Data Management Plan for StepUp-based Projects

    Python 2 1 0 0 Updated May 24, 2024
  • bibsane Public

    Sanitize BibTeX files without going insane.

    Python 9 GPL-3.0 0 0 1 Updated May 24, 2024
  • parman Public

    ParMan extends Python concurrent.futures to facilitate parallel workflows

    Python 0 LGPL-3.0 0 0 1 Updated May 20, 2024
  • .github Public

    Community health files

    0 0 0 1 Updated May 15, 2024
  • reprepbuild Public archive

    Build tool for Reproducible Reporting

    Python 1 GPL-3.0 1 1 1 Updated Apr 26, 2024

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