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@remap-cisreg

ReMap

List of repositories for the ReMap projects. ReMap is an integrative analysis of transcriptional regulators for DNA-binding experiments from public datasets

Pinned

  1. remap-pipeline remap-pipeline Public

    As the ReMap project expands dramatically and regulatory catalogs for other species are requested, it becomes essential to enable joint efforts between the ReMap team and external teams. This is es…

    Python 7 5

  2. ReMapEnrich ReMapEnrich Public

    ReMapEnrich is a R-software package to identify significantly enriched regions from ReMap catalogues or user defined catalogues. ReMapEnrich provide functions to import any in-house catalogue, auto…

    HTML 12 5

  3. peakMerge peakMerge Public

    Python 1

Repositories

Showing 5 of 5 repositories
  • remap-pipeline Public

    As the ReMap project expands dramatically and regulatory catalogs for other species are requested, it becomes essential to enable joint efforts between the ReMap team and external teams. This is essential for future collaborative production efforts. Briefly, our pipelines uses SnakeMake either in a Conda or Singularity environment depending on t…

    Python 7 5 1 0 Updated Apr 20, 2022
  • ReMapEnrich Public

    ReMapEnrich is a R-software package to identify significantly enriched regions from ReMap catalogues or user defined catalogues. ReMapEnrich provide functions to import any in-house catalogue, automate and plot the enrichment analysis for genomic regions.

  • Python 1 0 0 0 Updated Sep 3, 2021
  • remap-rest Public

    Language agnostic RESTful data access to ReMap data over HTTP

    Shell 1 1 0 0 Updated Mar 30, 2021
  • remap-docker-images Public

    Repository for docker images that are hosted on docker hub

    1 0 0 0 Updated May 15, 2019

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