Pinned

1. PB-Dataset-Recommender_Engine PB-Dataset-Recommender_Engine Public

   Algorithms for NCBI, SRA, EBI datasets recommendation and how to get around with comparing your own Datasets. Recommender systems | Bio-NLP

   Jupyter Notebook 2 1

2. compgenomics2021 compgenomics2021 Public

   Using un-assembled genome sequence data from the Centers for Disease Control and Prevention (CDC) proceed through five distinct stages of analysis and interpretation of that data: 1-genome assembly…

   AMPL 1

3. gsea-R gsea-R Public

   Methods for analysis of gene set enrichments, pathway analysis, gene ontologies, functional analysis of metabolomic profiling & understanding correlations and coexpression networks.

   R

4. Human_Protein_Atlas_challenge-kaggle-2021 Human_Protein_Atlas_challenge-kaggle-2021 Public

   Submission of Human Protein Atlas - Single Cell Classification on Kaggle 2021. A weakly supervised multi-label classification problem.

   Jupyter Notebook

5. DREAM_challenge-COVID-19_EHR DREAM_challenge-COVID-19_EHR Public

   DREAM challenge 2021 - To facilitate understanding risk factors that lead to a positive COVID-19 test utilizing electronic health recorded data mapped to the OMOP Common Data Model. UW Medicine cli…

   Jupyter Notebook 2

6. compgenomics-2021-Team2_WebServer compgenomics-2021-Team2_WebServer Public

   RApid Subtyping and Prediction for E coli. The web server developed by the Team for analysis of E coli.

   AMPL