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rabdill/README.md

Hi there 👋

  • 🔨 I'm a computational biologist at the University of Chicago, though I work remotely from my home in New Jersey, USA.
  • 🔬 My work is currently focused on microbial ecology, particularly as it relates to the the human gut microbiome.
  • 💻 I mostly use Python and R, though at various times I've worked on projects in Golang, JavaScript/Coffeescript, and PHP.
  • 🌐 More info available on my website

Pinned

  1. blekhmanlab/rxivist blekhmanlab/rxivist Public archive

    API providing access to papers and authors scraped from biorxiv.org

    Python 57 11

  2. blekhmanlab/panlingua blekhmanlab/panlingua Public archive

    Multilingual preprint search tool for bioRxiv

    Python 1

  3. blekhmanlab/rxivist_web blekhmanlab/rxivist_web Public archive

    Web application for Rxivist, the site that makes it easier to find the most talked-about papers on bioRxiv.org

    Smarty 11 4

  4. Turn a bitmap into an unsettling 3D map Turn a bitmap into an unsettling 3D map
    1 
    # Inspired by this twitter thread:
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    # https://twitter.com/tylermorganwall/status/1088978382195437568
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    # Using (and borrowing code from) the immaculate documentation here:
    
              
    
              
    
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    # https://github.com/clauswilke/isoband
    
              
    
          
    
    
    
  
    

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              blekhmanlab/rxivist_spider_biorxiv
blekhmanlab/rxivist_spider_biorxiv          Public archive
        
    
      
    


      
    
        Web crawler that indexes preprints posted to bioRxiv.org and medRxiv.org.
      
    

      
    
          
  
  Python


          
            
    

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color_palette_notes
color_palette_notes          Public
        
    
      
    


      
    
        Cheat sheet for avoiding problematic color palettes, plus where to find pleasant ones
      
    

      
    
      
    
    
    
  
    

    7.