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quinlan-lab

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bedqc bedqc Public

BED QC tool (in the making)

HTML 15 1
bedder-rs bedder-rs Public

an API for intersections of genomic data

Rust 74

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Showing 10 of 38 repositories

applied-computational-genomics Public
Applied Computational Genomics Course at UU: Spring 2020

HTML 921 CC-BY-SA-4.0 202 7 1 Updated Apr 5, 2024
transcriptionary Public

Python 1 MIT 0 0 0 Updated Apr 3, 2024
bedder-rs Public
an API for intersections of genomic data

Rust 74 MIT 0 4 0 Updated Apr 1, 2024
proj-mutator-mapping Public
Code for reproducing analysis and figures from https://elifesciences.org/reviewed-preprints/89096

Python 1 MIT 1 0 0 Updated Feb 23, 2024
mutator-epistasis-manuscript Public

HTML 0 CC-BY-4.0 3 0 1 Updated Oct 25, 2023
Snakemake_Tutorial Public

Python 4 1 0 0 Updated Aug 14, 2023
STRling Public
Detect novel (and reference) STR expansions from short-read data

Nim 59 MIT 9 20 (2 issues need help) 1 Updated Aug 7, 2023
CEPH-K1463-TandemRepeats Public Forked from hdashnow/CEPH-K1463-TandemRepeats

Jupyter Notebook 0 5 0 0 Updated Aug 1, 2023
ceph-dnm-manuscript Public
Code used for figure generation and statistical analysis for https://elifesciences.org/articles/46922

Jupyter Notebook 3 MIT 4 0 2 Updated Jul 6, 2023
human-rae-manuscript Public
code used for figure generation and statistical analysis for manuscript

Jupyter Notebook 3 MIT 0 0 0 Updated Dec 4, 2022

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