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A clear and concise description of what the bug is.
To Reproduce
Specify the necessary steps to reproduce the behavior. For example,
supply the setup.py command used for building if there is a build error,
or the steps taken when using the PyNE that produced the error.
Expected Behavior
A clear and concise description of what you expected to happen.
Screenshots or Code Snippets
If applicable, add screenshots or snippets of code and error messages to help explain your problem.
Note, please do not include screenshots or snippets of code that is export controlled.
Please complete the following information regarding your system:
OS: [e.g. ubuntu Linux]
PyNE Version: [e.g. 0.7.1]
Versions of dependencies installed with: [e.g. HDF5 1.10]
Additional Context
Add any other context about the problem here.
I am trying to install pyne with conda on my macos M1. I have created a .yml as mentioned here #1452, but still getting the same error as given in the attachment. Can someone please help.
Traceback (most recent call last):
File "/opt/miniconda3/lib/python3.9/site-packages/conda/exceptions.py", line 1118, in __call__
return func(*args, **kwargs)
File "/opt/miniconda3/lib/python3.9/site-packages/conda_env/cli/main.py", line 78, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/opt/miniconda3/lib/python3.9/site-packages/conda/notices/core.py", line 109, in wrapper
return func(*args, **kwargs)
File "/opt/miniconda3/lib/python3.9/site-packages/conda_env/cli/main_update.py", line 132, in execute
result[installer_type] = installer.install(prefix, specs, args, env)
File "/opt/miniconda3/lib/python3.9/site-packages/conda_env/installers/conda.py", line 49, in install
unlink_link_transaction = solver.solve_for_transaction(
File "/opt/miniconda3/lib/python3.9/site-packages/conda/core/solve.py", line 136, in solve_for_transaction
unlink_precs, link_precs = self.solve_for_diff(update_modifier, deps_modifier,
File "/opt/miniconda3/lib/python3.9/site-packages/conda/core/solve.py", line 179, in solve_for_diff
final_precs = self.solve_final_state(update_modifier, deps_modifier, prune, ignore_pinned,
File "/opt/miniconda3/lib/python3.9/site-packages/conda/core/solve.py", line 284, in solve_final_state
ssc = self._collect_all_metadata(ssc)
File "/opt/miniconda3/lib/python3.9/site-packages/conda/common/io.py", line 84, in decorated
return f(*args, **kwds)
File "/opt/miniconda3/lib/python3.9/site-packages/conda/core/solve.py", line 451, in _collect_all_metadata
index, r = self._prepare(prepared_specs)
File "/opt/miniconda3/lib/python3.9/site-packages/conda/core/solve.py", line 1061, in _prepare
reduced_index = get_reduced_index(self.prefix, self.channels,
File "/opt/miniconda3/lib/python3.9/site-packages/conda/core/index.py", line 275, in get_reduced_index
push_record(record)
File "/opt/miniconda3/lib/python3.9/site-packages/conda/core/index.py", line 249, in push_record
combined_depends = record.combined_depends
File "/opt/miniconda3/lib/python3.9/site-packages/conda/models/records.py", line 338, in combined_depends
result = {ms.name: ms for ms in MatchSpec.merge(self.depends)}
File "/opt/miniconda3/lib/python3.9/site-packages/conda/models/match_spec.py", line 481, in merge
reduce(lambda x, y: x._merge(y, union), group) if len(group) > 1 else group[0]
File "/opt/miniconda3/lib/python3.9/site-packages/conda/models/match_spec.py", line 481, in <lambda>
reduce(lambda x, y: x._merge(y, union), group) if len(group) > 1 else group[0]
File "/opt/miniconda3/lib/python3.9/site-packages/conda/models/match_spec.py", line 512, in _merge
final = this_component.merge(that_component)
File "/opt/miniconda3/lib/python3.9/site-packages/conda/models/match_spec.py", line 787, in merge
raise ValueError("Incompatible component merge:\n - %r\n - %r"
ValueError: Incompatible component merge:
- 'mpi_openmpi_*'
- 'mpi_openmpi_tempest*'
An unexpected error has occurred. Conda has prepared the above report.
If submitted, this report will be used by core maintainers to improve
future releases of conda.
Would you like conda to send this report to the core maintainers? [y/N]: N
No report sent. To permanently opt-out, use
$ conda config --set report_errors false
The text was updated successfully, but these errors were encountered:
Hi, and welcome to PyNE! 👋 Thanks for opening your first issue. We recommend that you include information such as the version of PyNE you're working with (eg, develop branch or a specific version), the platform you are operating on, the expected behavior, and the actual behavior you are bringing our attention to. The more deatil you provide, the better others in this community will be able to help you.
I know we have not explicitly added support for Apple silicon to our conda-forge images, so that may be part of the issue. We'll have to investigate on the next release/re-spin of our conda feedstock.
Describe the Bug
A clear and concise description of what the bug is.
To Reproduce
Specify the necessary steps to reproduce the behavior. For example,
supply the setup.py command used for building if there is a build error,
or the steps taken when using the PyNE that produced the error.
Expected Behavior
A clear and concise description of what you expected to happen.
Screenshots or Code Snippets
If applicable, add screenshots or snippets of code and error messages to help explain your problem.
Note, please do not include screenshots or snippets of code that is export controlled.
Please complete the following information regarding your system:
Additional Context
Add any other context about the problem here.
I am trying to install pyne with conda on my macos M1. I have created a .yml as mentioned here #1452, but still getting the same error as given in the attachment. Can someone please help.
This is the error I am getting.
conda env update --file pyne.yml
Collecting package metadata (repodata.json): failed
>>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
$ /opt/miniconda3/bin/conda-env update --file pyne.yml --prune
environment variables:
CIO_TEST=
CONDA_AUTO_UPDATE_CONDA=false
CONDA_DEFAULT_ENV=nuclear
CONDA_EXE=/opt/miniconda3/bin/conda
CONDA_PREFIX=/opt/miniconda3/envs/nuclear
CONDA_PREFIX_1=/opt/miniconda3
CONDA_PREFIX_2=/opt/miniconda3/envs/tardis-nuclear
CONDA_PREFIX_3=/opt/miniconda3
CONDA_PROMPT_MODIFIER=(nuclear)
CONDA_PYTHON_EXE=/opt/miniconda3/bin/python
CONDA_ROOT=/opt/miniconda3
CONDA_SHLVL=4
CURL_CA_BUNDLE=
INFOPATH=/opt/homebrew/share/info:
LD_PRELOAD=
MANPATH=/opt/homebrew/share/man::
PATH=/opt/miniconda3/envs/nuclear/bin:/opt/miniconda3/condabin:/opt/homebre
w/bin:/opt/homebrew/sbin:/usr/local/bin:/System/Cryptexes/App/usr/bin:
/usr/bin:/bin:/usr/sbin:/sbin:/opt/X11/bin:/Library/Apple/usr/bin:/var
/run/com.apple.security.cryptexd/codex.system/bootstrap/usr/local/bin:
/var/run/com.apple.security.cryptexd/codex.system/bootstrap/usr/bin:/v
ar/run/com.apple.security.cryptexd/codex.system/bootstrap/usr/appleint
ernal/bin:/Users/anirbandutta/.iraf/bin:/Users/anirbandutta/.iraf/bin:
/Users/anirbandutta/.iraf/bin
REQUESTS_CA_BUNDLE=
SSL_CERT_FILE=
populated config files : /Users/anirbandutta/.condarc
conda version : 22.11.1
conda-build version : not installed
python version : 3.9.5.final.0
virtual packages : __archspec=1=x86_64
__osx=10.16=0
__unix=0=0
base environment : /opt/miniconda3 (writable)
conda av data dir : /opt/miniconda3/etc/conda
conda av metadata url : None
channel URLs : http://ssb.stsci.edu/astroconda/osx-64
http://ssb.stsci.edu/astroconda/noarch
https://repo.anaconda.com/pkgs/main/osx-64
https://repo.anaconda.com/pkgs/main/noarch
https://repo.anaconda.com/pkgs/r/osx-64
https://repo.anaconda.com/pkgs/r/noarch
package cache : /opt/miniconda3/pkgs
/Users/anirbandutta/.conda/pkgs
envs directories : /opt/miniconda3/envs
/Users/anirbandutta/.conda/envs
platform : osx-64
user-agent : conda/22.11.1 requests/2.26.0 CPython/3.9.5 Darwin/22.5.0 OSX/10.16
UID:GID : 501:20
netrc file : None
offline mode : False
An unexpected error has occurred. Conda has prepared the above report.
If submitted, this report will be used by core maintainers to improve
future releases of conda.
Would you like conda to send this report to the core maintainers? [y/N]: N
No report sent. To permanently opt-out, use
The text was updated successfully, but these errors were encountered: