Releases: pinellolab/DNA-Diffusion
Releases 路 pinellolab/DNA-Diffusion
v0.0.0.dev0
Changes
- added vq_vae_accelerate notebook and trained vq_vae model model4cells (#101) @ttunja
- adding the kmer metrics (#100) @hssn-20
- Adding notebook for filtering master_dataset (#76) @ssenan
- adding the time warping functionality (#63) @noahweber1
- Update README.md (#73) @Ryams
- DDIM Sampling implemented (#65) @mihirneal
- Resolve contributor list in an independant file (#25) @IhabBendidi
- Fixes formatting in the 'Tasks and Potential Roadmap' section (#1) @jxilt
馃殌 Features
- pytorch-lightning/hydra-zen integration (#105) @ssenan
- merge codebase changes on main into default (#92) @cameronraysmith
- Fixed script pathing, now works as intended on cluster (#87) @ssenan
- Adding subscripts created from original single script (#84) @ssenan
- refactor: (minor) vq-vae (#61) @SauravMaheshkar
- Adding the modified NB (#60) @noahweber1
馃 Fixes
- Changes all import lightning to import pytorch_lightning (#127) @ssenan
- Comment out config.py to resolve pre-commit parsing error (#99) @ssenan
馃毃 Testing
- Update the unit tests (#71) @jamesthesnake
馃懛 Continuous Integration
- make release depend on build and docker (#129) @cameronraysmith
- add release workflows (#125) @cameronraysmith
- Comment out config.py to resolve pre-commit parsing error (#99) @ssenan
- add actions/stale for issues and prs (#82) @cameronraysmith
- add pre-commit configuration (#80) @cameronraysmith
馃摎 Documentation
- use smaller README image (#131) @cameronraysmith
- add documentation (#119) @cameronraysmith
- update metadata (#112) @cameronraysmith
- add actions/stale for issues and prs (#82) @cameronraysmith
- add contributor covenant code of conduct (#78) @cameronraysmith
馃敤 Refactoring
- Removed validation metrics from sampling metrics (#108) @ssenan
- merge codebase changes on main into default (#92) @cameronraysmith
- Fixed script pathing, now works as intended on cluster (#87) @ssenan
- Adding subscripts created from original single script (#84) @ssenan
- refactor: (minor) vq-vae (#61) @SauravMaheshkar
- Adding the modified NB (#60) @noahweber1
馃摝 Dependencies
- add docker container (#121) @cameronraysmith
- add build system (#117) @cameronraysmith