Update pytests #207
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Update pytests #207
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calvinlu3
requested changes
Nov 1, 2023
test_Annotation.py
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| @@ -16,21 +16,18 @@ | |||
| from AnnotatorCore import HGVSgQuery | |||
| from AnnotatorCore import ReferenceGenome | |||
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| ONCOKB_API_TOKEN = os.environ["ONCOKB_API_TOKEN"] | |||
| ONCOKB_API_TOKEN = '5d682637-c3c8-4353-b623-347d8f8ca5c2' | |||
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I think you accidently committed your token.
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Also think the tests are failing because token was removed here.
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@calvinlu3 the reason the tests failing is because the fork branch cannot use the main repo secret.
test_Annotation.py
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| MUTATION_EFFECT_INDEX = VARIANT_EXISTS_INDEX+1 | ||
| ONCOGENIC_INDEX = MUTATION_EFFECT_INDEX+2 | ||
| LEVEL_1_INDEX = ONCOGENIC_INDEX+1 | ||
| LEVEL_2_INDEX = LEVEL_1_INDEX+1 | ||
| LEVEL_3A_INDEX = LEVEL_1_INDEX+2 | ||
| HIGHEST_LEVEL_INDEX = LEVEL_1_INDEX+7 | ||
| HIGHEST_DX_LEVEL_INDEX = HIGHEST_LEVEL_INDEX+7 | ||
| HIGHEST_PX_LEVEL_INDEX = HIGHEST_DX_LEVEL_INDEX+5 |
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flake8 is complaining about no spaces around + sign.
Remove 2.7 test environment 2.7 has been removed since June 19
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