This is a representative demonstration of functionalities offered by the program Cellulyzer. The goals are 1) automated tracking and track-analyses of groups of images, and 2) interactive visualization and simulation of cellular processes.
These functionalities have been developed primarily as a Plugin and two Macros for the common bio-image analysis software ImageJ (Fiji). Some functionalities are also available in Javascript (to be run simply with a web-browser) and C++.
The arXiv report is accessible here: https://arxiv.org/abs/1703.02611
For questions or comments regarding the programs, please contact jafarpour.a.j@ieee.org
Quick tour
Overview of the program
Simulated cellular processes
Automated analysis (with interactive parameter adjustment)
Multi-Channel Kinetics
Simulated centrosomes: (Left) original, (Middle) paired, and (Right) tracked
Interactive simulations: step-by-step
3D Spindle
Centrosome Pairs
EB_Mitosis_Dynamics
Realistic spot (anisotropic Gaussian intensity distribution)
Deconvolution and Super-Resolution
