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I currently have an error that my reference genome is about 14Gb, causing my bed file to be too large to establish tbi index, I would like to know how to modify it to establish csi index, thank you for your help.
Command used and terminal output
Command error: INFO: Environment variable SINGULARITYENV_TMPDIR is set, but APPTAINERENV_TMPDIR is preferred INFO: Environment variable SINGULARITYENV_NXF_TASK_WORKDIR is set, but APPTAINERENV_NXF_TASK_WORKDIR is preferred INFO: Environment variable SINGULARITYENV_NXF_DEBUG is set, but APPTAINERENV_NXF_DEBUG is preferred [E::hts_idx_check_range] Region 536904516..536917009 cannot be stored in a tbi index. Try using a csi index tbx_index_build failed: up_down_2k_promoters.all.bed.gzWork dir: /cluster/home/fanrong/work_lei/BSA/02_ZS/02_mapping_1/work/f9/901b8ac1827e6196b65b21ba97e017Tip: you can try to figure out what's wrong by changing to the process work dir and showing the script file named `.command.sh` -- Check '.nextflow.log' file for details
Relevant files
No response
System information
No response
The text was updated successfully, but these errors were encountered:
Description of the bug
I currently have an error that my reference genome is about 14Gb, causing my bed file to be too large to establish tbi index, I would like to know how to modify it to establish csi index, thank you for your help.
Command used and terminal output
Relevant files
No response
System information
No response
The text was updated successfully, but these errors were encountered: