Issues: nf-core/rnaseq
New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
Author
Label
Projects
Milestones
Assignee
Sort
Issues list
QUALIMAP_RNASEQ error simultaneous access on same dir
bug
Something isn't working
#1298
opened May 9, 2024 by
redvoidling
NFCORE_RNASEQ:RNASEQ:ALIGN_STAR:STAR_ALIGN_IGENOMES Segmentation fault
bug
Something isn't working
#1294
opened May 7, 2024 by
fjosefdz
NFCORE_RNASEQ:RNASEQ:ALIGN_STAR:STAR_ALIGN: failed with exit status 140 and 102
#1292
opened May 2, 2024 by
DollyCM
Pipe line Error with HiSAT2 Aligner
bug
Something isn't working
#1288
opened Apr 29, 2024 by
merang2050
Add additional FastQC step after optional BBSplit and/or SortMeRNA
enhancement
#1276
opened Mar 28, 2024 by
ppericard
Two Bigwig files per sample are generated representing each strand
enhancement
#1275
opened Mar 26, 2024 by
drimran87
Qualimap assigns more reads to exonic regions than total reads in the sample
bug
Something isn't working
#1273
opened Mar 21, 2024 by
ctuni
NFCORE_RNASEQ:RNASEQ:FASTQ_ALIGN_HISAT2:HISAT2_ALIGN (pituitary_stage3-1)
terminated with an error exit status (1)
bug
#1270
opened Mar 19, 2024 by
hyBio
extra_salmon_quant_args quote issue
bug
Something isn't working
#1257
opened Mar 11, 2024 by
kdivilov
invalid literal for int() with base 10: '0.79;logic_name=cpg'
bug
Something isn't working
#1215
opened Feb 16, 2024 by
ZabalaAitor
Issue in NFCORE_RNASEQ:RNASEQ:QUANTIFY_PSEUDO_ALIGNMENT:TX2GENE (genome.filtered.gtf)
bug
Something isn't working
#1204
opened Jan 30, 2024 by
alexmascension
Having issues similar to #1003 "FASTQ_SUBSAMPLE_FQ_SALMON:SALMON_INDEX is launched multiple times and fails"
bug
Something isn't working
#1203
opened Jan 30, 2024 by
Jgarlan1
FASTP trimming Smart3-seq data removes all reads (UMI discard read2)
bug
Something isn't working
#1200
opened Jan 23, 2024 by
mschubert
STAR biocontainer is incorrect (not 2.7.10a version)
bug
Something isn't working
#1198
opened Jan 22, 2024 by
mauro-saporita
second and third columns meaning in tx2gene.tsv from star_salmon
#1193
opened Jan 16, 2024 by
jdanaK
Previous Next
ProTip!
Add no:assignee to see everything that’s not assigned.