gibbs-sampler-motif-finding

This python script is an implementation of gibbs sampling used to find pattern in the sequences of character. One popular example is to find motif in DNA sequence.

Run from another script

First, import module gibbs then called the method sampling with arguments sequence and word length the output is the position of the word for each sequence

See https://mitbal.wordpress.com/2014/01/27/gibbs-sampling/ for more explanation about the code (in Indonesian).