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55 Open 165 Closed
55 Open 165 Closed
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Issues list

Use vegan in rarefy
#561 opened May 28, 2024 by TuomasBorman
1
Error length.out in subsampleCounts()
#560 opened May 28, 2024 by imonteroo
@thpralas
3
Unclear matrix row after agglomerateByRank
#559 opened May 24, 2024 by maartenciers
@ake123
4
mergeSEs: tree merging
#558 opened May 24, 2024 by TuomasBorman
@Daenarys8
Get top explanatory features from PCoA loadings enhancement New feature or request
#541 opened May 9, 2024 by RiboRings
@RiboRings
9
get vs. add
#535 opened Apr 25, 2024 by antagomir
R CMD Check contains NOTES
#532 opened Apr 24, 2024 by TuomasBorman
@ake123
2
Faith index
#522 opened Apr 18, 2024 by antagomir
addHierarchyTree replaces existing tree
#498 opened Mar 1, 2024 by TuomasBorman
@Daenarys8
2
readQZA fails
#491 opened Feb 13, 2024 by antagomir
3
Use pseudocount=TRUE in transformAssay even with missing or zero values
#489 opened Feb 13, 2024 by artur-sannikov
9
More layouts for plotAbundanceDensity
#481 opened Jan 12, 2024 by artur-sannikov
1
MARGIN and altexp parameters
#480 opened Dec 21, 2023 by TuomasBorman
@Daenarys8
1
Function naming, logic, aliases
#474 opened Nov 24, 2023 by TuomasBorman
@thpralas
7
transformAssay input
#467 opened Oct 18, 2023 by antagomir
@jepasan
Rarified beta diversity calculations
#463 opened Oct 17, 2023 by antagomir
@thpralas
10
Harmonizing documentation
#458 opened Oct 5, 2023 by TuomasBorman
1
Consider rworkflows
#457 opened Sep 29, 2023 by TuomasBorman
Clean up the manpages
#450 opened Sep 22, 2023 by antagomir
3
Optimize mapTaxonomy
#445 opened Sep 9, 2023 by antagomir
@Insaynoah
subset functions and trees
#443 opened Sep 7, 2023 by TuomasBorman
1
Suggestion to remove na.action argument from runRDA
#432 opened Aug 28, 2023 by RiboRings
@TuomasBorman
2
Batch transformations.
#429 opened Aug 26, 2023 by antagomir
1
Critical issue with mergeFeaturesByPrevalence
#419 opened Aug 12, 2023 by antagomir
@antagomir @ake123
@TuomasBorman @Daenarys8
13
Rarefaction as optional strategy for alpha diversity
#417 opened Aug 10, 2023 by antagomir
1
2
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