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ladyson1806/README.md

Hello world 👋

About me 💻🤓

I am a passionate bioinformatician who love working with tons of various omics data for investigating the molecular mechanisms behind complex traits, and more specifically drug-response phenotypes, aging and age-associated diseases.

Current position

  • Bioinformatician Post-Doctoral Researcher @ Université Paris Cité - CNRS UMR7592 / Institut Jacques Monod (Paris, FRANCE)
  • Project in collaboration with
    • Michael Rera, PhD (Website) [CNRS]
    • Marc Santolini, PhD (Website) [Learning Planet Institute]

Academic background

  • PhD candidate in Bioinformatics @ Université de Montréal (Montréal, CANADA)
  • Supervision by
    • Adrian Serohijos, PhD (Website) [Université de Montréal]
    • Julie Hussin, PhD (Website) [Université de Montréal]

Expertises and interests

$\bullet$ Bioinformatics $\bullet$ Systems Biology $\bullet$ Evolutionary Genomics $\bullet$ Comparative Genomics $\bullet$ Statistical Genomics

$\bullet$ Complex traits $\bullet$ Omics-data science $\bullet$ Biological Networks $\bullet$ GWAS $\bullet$ QTL mapping $\bullet$ Biology of Aging $\bullet$ Evolution of Aging
$\bullet$ Conventional (S. cerevisiae, D. melanogaster, D. renio, M. musculus) and non conventional (H. glaber) model organisms

Lastest publications

  • Flaminia Zane, Hayet Bouzid, Sofia Sosa Marmol, Mira Brazane, Savandara Besse, Julia Lisa Molina, Céline Cansell, Fanny Aprahamian, Sylvère Durand, Jessica Ayache, Christophe Antoniewski, Michael Rera, Smurfness-based two-phase model of ageing helps deconvolve the ageing transcriptional signature, Soon published in Aging Cell, 2023, (Code)

  • Savandara Besse, Raphaël Poujol, Julie Hussin, Comparative study of protein aggregation propensity and mutation tolerance between naked mole-rat and mouse, Published in Genome Biology and Evolution, 2022, evac057 (Code)

  • Leo Blondel, Savandara Besse, Emily Rivard, Guillem Ylla, Cassandra Extavour, Evolution of a cytoplasmic determinant: evidence for the biochemical basis of functional evolution of the novel germ line regulator oskar, Published in Molecular Biology and Evolution, 2021, msab284 (Code)

Latest news

  • 06/24/2024 to 06/28/2024: I'll be at JOBIM Toulouse! Say hi, if you see me there 😊
  • 09/23/2023: PhD Defended! 🎉

Where can you find me?

Pinned

  1. SerohijosLab-piQTL SerohijosLab-piQTL Public

    GitHub Repository associated with the piQTL project (Mapping effects of genome-wide genetic variation to protein-protein interactions reveals molecular mechanisms of complex traits) [ Serohijos & M…

    Jupyter Notebook 4 1

  2. NKR_lifespan NKR_lifespan Public

    GitHub Repository associated to the study of H. glaber and M.musculus shared proteome for understanding their difference in maximum lifespan [ Hussin Lab, Université de Montréal ]

    Jupyter Notebook

  3. Oskar_Evolution Oskar_Evolution Public

    Forked from extavourlab/Oskar_Evolution

    Leo Blondel, Savandara Besse, Cassandra Extavour (2021)

    Turing

  4. AEBINUM AEBINUM Public

    Jupyter Notebook 2

  5. Miscellaneous Miscellaneous Public

    Python 2