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PEPPER-Margin-DeepVariant r0.8 update

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@kishwarshafin kishwarshafin released this 16 Mar 20:32
· 4 commits to r0.8 since this release

In this release:

  • Separate SNP and INDEL calling with DeepVariant: SNP calling with none and INDEL calling with rows.
  • Parameters to select manual SNP and INDEL models for DeepVariant.
  • Parameter separation to handle candidates in repeat regions within PEPPER.
  • Update and fix training documentation.
  • Update to DeepVariant version 1.3.0.