Make sure temp directory exists when splitting queries #238

juliema · Feb 22, 2019 · 371aa9b · 371aa9b
1 parent 5b50a85
commit 371aa9b
Showing 1 changed file with 2 additions and 1 deletion.
diff --git a/lib/core_atram.py b/lib/core_atram.py
@@ -14,14 +14,15 @@
 
 def assemble(args):
     """Loop thru every blast/query pair and run an assembly for each one."""
-    queries = split_queries(args)
 
     with util.make_temp_dir(
             where=args['temp_dir'],
             prefix='atram_',
             keep=args['keep_temp_dir']) as temp_dir:
         util.update_temp_dir(temp_dir, args)
 
+        queries = split_queries(args)
+
         for blast_db in args['blast_db']:
 
             with db.connect(blast_db, check_version=True) as cxn: