Bioinformatician with interests in bioinformatics, precision medicine and single-cell RNA-seq.
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Enhanc3d Genomics
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Drop-seq_pipeline
Drop-seq_pipeline PublicThis is the pipeline to perform a Drop-seq simulation based benchmark - see https://www.biorxiv.org/content/early/2018/01/17/248716
Shell 1
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Julia_GPU_examples
Julia_GPU_examples PublicGithub host for Julia GPU tutorial hosted at https://jenni-westoby.github.io/Julia_GPU_examples/dev/
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RNG_JuliaGPU
RNG_JuliaGPU PublicA basic GPU implementation of the Mersenne Twister algorithm in Julia
Julia
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ES_cell_pipeline
ES_cell_pipeline PublicBenchmarking pipeline published in https://genomebiology.biomedcentral.com/articles/10.1186/s13059-018-1571-5
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