Notebooks with examples presented in the paper "Design ideas behind Bioprocess Library for Modelica", by J. P. Axelsson, presented at the 15th International Modelica Conference, Aachen, Germany, October 9-11, 2023, see the proceeding here on page 453-462.
Figure 2 - You start up the notebook in Colab by pressing here start BPL notebook or here start BPL notebook with FMPy
Figure 3 - You start up the notebook in Colab by pressing here start BPL notebook or here start BPL notebook with FMPy
Figure 6 - You start up the notebook in Colab by pressing here start BPL notebook or here start BPL notebook with FMPy
Click on Runtime/Run all - and then wait a couple of minutes for the packages to load, finally the script is run in seconds. Feel free to continue to interact with the notebook. Note, you need to have a gmail-address to use Google Colab.
If you are interested in more complex models closer to the industrial reality, take a look at the repositories:
- BPL_YEAST_AIR_Fedbatch - simulates yeast production and include by-product formation and dissolved oxygen control
- BPL_CHO_Fedbatch - mammalian cells CHO and include by-product formation and recombinant protein production
- BPL_IEC_operation - ion exhange chromatography used for separation of protein product from other proteins
Note that:
- The script occassionaly get stuck during installation. Then just close the notebook and start from scratch.
- Remember, you need to have a google-account!
Just to be clear, no installation is done at your local computer.
License information:
- The binary-file with extension FMU is shared under the permissive MIT-license
- The other files are shared under the GPL 3.0 license