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isinaltinkaya/README.md

Hi, I'm Isin!

I am a Ph.D. fellow at the University of Copenhagen, supervised by Thorfinn Sand Korneliussen and Rasmus Nielsen.

I am interested in bioinformatics, population genetics and statistical genomics. More specifically, my research interest revolves around developing novel methods and statistical frameworks aiming to disentangle evolutionary histories of populations, and implementing these methods into fast and efficient software.

I am a Linux geek <i use arch btw> & i3wm & vim. I love statically-typed & systems programming languages. I love investigating/finding/fixing/thinking-about bugs, especially the most sneaky and annoying ones. I like reading, playing video games, programming, rambling about philosophy, cringing at bad physics/popsci takes, stoicism, playing piano & electric guitar, blitz chess, skateboarding and speedcubing.

For more, you can check my personal website at isinaltinkaya.com, or find me on:

➡️ Isin AltinkayaMastodon @IsinAltinkaya

➡️ Isin Altinkaya | Twitter Twitter @IsinAltinkaya

You can contact me by e-mail at isin.altinkayaGGGGGGGG@sund.ku.dk, with poly-G tail removed.

Pinned

  1. ngsAMOVA ngsAMOVA Public

    Tool for performing AMOVA, Dxy and neighbor joining trees with NGS data

    C++ 1

  2. vcfgl vcfgl Public

    Genotype likelihood simulator for VCF/BCF files

    C++ 6 1

  3. ANGSD/angsd ANGSD/angsd Public

    Program for analysing NGS data.

    C++ 221 52

  4. gptchatteR gptchatteR Public

    An experimental and unofficial wrapper for interacting with OpenAI GPT models in R.

    R 124 19

  5. ANGSD/decluster ANGSD/decluster Public

    C++ 1

  6. SamueleSoraggi/HMMploidy SamueleSoraggi/HMMploidy Public

    A tool to calculate ploidy levels from genotype likelihoods and coverage using Hidden Markov Models

    R 14 2