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Immunoinformatics

[New home: https://github.com/immunomind] Statistical immunoinformatics, computational immunology and machine learning: research & software tools development.

Popular repositories

  1. tcr tcr Public

    [DEPRECATED, see https://immunarch.com/] tcR: an R package for immune receptor repertoire advanced data analysis.

    R 36 22

  2. hex hex Public

    (Halted, unfinished) HLA Extractor - a simple HLA typing tool.

    Jupyter Notebook 3 1

  3. mhc mhc Public

    Jupyter Notebook 3 1

  4. ymir ymir Public

    (Under development) Computational framework for probabilistic models of immune receptor assembling.

    C++ 1 1

  5. mrd-paper mrd-paper Public

    Code for the paper on TCR gene rearrangements in minimal residual disease (MRD).

    Python 1

  6. lynxy lynxy Public

    C++

Repositories

Showing 8 of 8 repositories
  • tcr Public

    [DEPRECATED, see https://immunarch.com/] tcR: an R package for immune receptor repertoire advanced data analysis.

    R 36 22 0 0 Updated Jun 8, 2020
  • ymir Public

    (Under development) Computational framework for probabilistic models of immune receptor assembling.

    C++ 1 Apache-2.0 1 1 0 Updated Aug 6, 2018
  • mhc Public
    Jupyter Notebook 3 1 0 0 Updated Apr 25, 2017
  • immdeep Public
    Jupyter Notebook 0 1 0 0 Updated Apr 20, 2017
  • lynxy Public
    C++ 0 Apache-2.0 0 9 0 Updated Aug 8, 2016
  • mhc-prediction-project Public

    MHC:peptide binding prediction. Project was done by students at the 4th Bioinformatics Summer School in July 2016.

    Jupyter Notebook 0 MIT 0 0 0 Updated Aug 2, 2016
  • mrd-paper Public

    Code for the paper on TCR gene rearrangements in minimal residual disease (MRD).

    Python 0 Apache-2.0 1 0 0 Updated Mar 10, 2016
  • hex Public

    (Halted, unfinished) HLA Extractor - a simple HLA typing tool.

    Jupyter Notebook 3 Apache-2.0 1 1 0 Updated Feb 11, 2016

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