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Issues list

Error when running brie-count: IndexError: list index out of range
#61 opened Jan 15, 2024 by fweberling
1
split cells into groups and run brie2
#60 opened Jul 28, 2023 by caochch
3
How to get the specific sites where differential splicing events occurs
#58 opened Jun 29, 2023 by TuoCai2000
MXE chromosomecoordinates to gene_ids
#57 opened Jun 20, 2023 by TdzBAS
p values outputfile
#56 opened May 16, 2023 by TdzBAS
confused about Psi_95CI
#55 opened Apr 30, 2023 by QuanlongJiang
1
Brie-count error with paired end smart-seq2 data
#54 opened Apr 6, 2023 by Stephen1202-Wang
1
some questions about psi distribution
#53 opened Feb 13, 2023 by TuoCai2000
multiple 10x samples integration to run brie-count
#51 opened Dec 28, 2022 by TuoCai2000
1
visualize sashimi plot with brie2
#50 opened Oct 21, 2022 by TuoCai2000
3
the errors about the brie-count
#48 opened Jul 12, 2022 by liuyu988
2
the output of brie-count don't contain the .h5ad file
#47 opened Jul 12, 2022 by liuyu988
3
Other AS types counting, no output
#45 opened Jul 11, 2022 by zhaoshuoxp
6
Brie-Count and Brie-Quant Errors
#44 opened Jun 28, 2022 by ri2gu
7
Brie-quant input
#42 opened May 12, 2022 by gabee-chan
2
Mode 1 and gene features
#39 opened Feb 8, 2022 by Lavieenrose123
6
UnboundLocalError: local variable 'adata' referenced before assignment
#38 opened Dec 1, 2021 by hyjforesight
1
get the PSI for every alternative splicing event in every cell
#37 opened Aug 16, 2021 by Laura-1997
1
splicing events annotations
#21 opened Dec 4, 2018 by jphe
filter out low coverage event
#20 opened Nov 28, 2018 by jphe
1
Comparing groups of single cells
#19 opened Sep 25, 2018 by ghost
4
Invalid divide value in brie_MH_Heuristic
#16 opened Jul 25, 2018 by trevortknguyen
Other spling types filter (A5SS, A3SS, MXE, RI)
#11 opened Mar 21, 2018 by chenjiwei124128
2
brie-event cannot read .gtf file
#9 opened Feb 5, 2018 by aarzalluz
6
Counts in fractions.tsv
#5 opened May 31, 2017 by linkerst
2
ProTip! no:milestone will show everything without a milestone.