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Popular repositories

  1. wgd wgd Public

    Forked from arzwa/wgd

    wgd v2: a suite of tools to uncover and date ancient polyploidy and whole-genome duplication

    Python 17

  2. Whale.jl Whale.jl Public

    Forked from arzwa/Whale.jl

    Amalgamated likelihood estimation with a DL + WGD model

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  3. whaleprep whaleprep Public

    Forked from arzwa/whaleprep

    Nextflow pipeline for preparatory analyses for Whale

    Nextflow

  4. ksrates ksrates Public

    Forked from VIB-PSB/ksrates

    ksrates is a tool to position whole-genome duplications relative to speciation events using substitution-rate-adjusted mixed paralog-ortholog Ks distributions.

    Python

  5. angst angst Public

    Forked from almlab/angst

    Analyzer of Gene and Species Trees

    Python

  6. SubPhaser SubPhaser Public

    Forked from zhangrengang/SubPhaser

    Phase and visualize subgenomes of an allopolyploid or hybrid based on the repetitive kmers.

    Python