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@haddocking

HADDOCK

Computational Structural Biology Group @ Utrecht University

Pinned

  1. haddock3 haddock3 Public

    Official repo of the modular BioExcel version of HADDOCK

    Python 82 25

  2. arctic3d arctic3d Public

    Automatic Retrieval and ClusTering of Interfaces in Complexes from 3D structural information

    Python 23 5

  3. pdb-tools pdb-tools Public

    A dependency-free cross-platform swiss army knife for PDB files.

    Python 358 111

  4. prodigy prodigy Public

    Predict the binding affinity of protein-protein complexes from structural data

    Python 91 23

  5. fcc fcc Public

    Fraction of Common Contacts Clustering Algorithm for Protein Structures

    Python 23 16

  6. haddock-runner haddock-runner Public

    Run large scale HADDOCK simulations using multiple input molecules in different scenarios

    Go 2 1

Repositories

Showing 10 of 58 repositories
  • arctic3d Public

    Automatic Retrieval and ClusTering of Interfaces in Complexes from 3D structural information

    Python 23 Apache-2.0 5 6 4 Updated May 7, 2024
  • haddock-runner Public

    Run large scale HADDOCK simulations using multiple input molecules in different scenarios

    Go 2 Apache-2.0 1 0 0 Updated May 7, 2024
  • cport Public

    CPORT is a Consensus Prediction Of interface Residues in Transient complexes used to predict protein-protein interface residues.

    Python 2 Apache-2.0 3 5 3 Updated May 6, 2024
  • haddock3 Public

    Official repo of the modular BioExcel version of HADDOCK

    Python 82 Apache-2.0 25 20 10 Updated May 3, 2024
  • proABC-2 Public

    Deep learning framework to predict antibody paratope residues

    Python 0 Apache-2.0 0 1 1 Updated May 2, 2024
  • prodigy-cryst Public

    Contacts-based classifier of biological and crystallographic interfaces

    Python 7 Apache-2.0 4 0 0 Updated Apr 30, 2024
  • pdb-tools Public

    A dependency-free cross-platform swiss army knife for PDB files.

    Python 358 Apache-2.0 111 12 6 Updated Apr 28, 2024
  • prodigy-lig Public

    Prediction of Protein-Small molecule binding affinities

    Python 11 Apache-2.0 4 1 0 Updated Apr 26, 2024
  • prodigy Public

    Predict the binding affinity of protein-protein complexes from structural data

    Python 91 Apache-2.0 23 0 0 Updated Apr 26, 2024
  • whiscy Public

    Bioinformatic tool to predict structural protein-protein interfaces

    R 3 Apache-2.0 2 1 0 Updated Apr 26, 2024