The draft genome sequence Bradyrhizobium sp. USDA 3456 a historic diazotroph agriculture strain from Cowpea (Vigna unguiculata).

Manuscript is currently in process

This is the code and analysis for this article.

Journal Article is: Richard Allen White III, Jeff Norman, Emily E. Mclachlan, Joseph P. Dunham, Aaron Garoutte, Maren L. Friesen The draft genome sequence Bradyrhizobium sp. USDA 3456 a historic diazotroph agriculture strain from Cowpea (Vigna unguiculata). Microbiology Resource Announcements (MRA).

Analysis

This repo holds a workflow script to process Illumina sequencing read data with quality trimming and removal of phiX174, de novo genome assembly of quality controlled sequence reads and to annotate the genome.

Data

Raw and quality controls reads, assemblies, and annotations are also at Open Science Framework (OSF) repo link
NCBI GenBank BioProject number is PRJNA550454 link

The informatics point-of-contact for this project is Dr. Richard Allen White III.
If you have any questions or feedback, please feel free to get in touch by email. Dr. Richard Allen White III - raw937@gmail.com.
Or open an issue.