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Achievement: Pair Extraordinairex2Achievement: Pull Sharkx3Achievement: YOLOAchievement: QuickdrawAchievement: StarstruckAchievement: Arctic Code Vault Contributor
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Achievements

Achievement: Pair Extraordinairex2Achievement: Pull Sharkx3Achievement: YOLOAchievement: QuickdrawAchievement: StarstruckAchievement: Arctic Code Vault Contributor
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@compgenunb
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fmalmeida/README.md

Hello 😁 👋

Hello there, my name is Felipe Almeida, a brazilian scientist, bioinformatician, pipeline developer and problem solver. My main interests are: Bioinformatics, genomic surveillance, precision medicine, and microbial genomics. You can also find me on twitter @fmarquesalmeida, stackoverflow and linkedin.

Academic info

I'm a PhD student at the University of Brasilia, at the CompGen (Computational Genomics) laboratory with academic guidance from PhD. Prof. Georgios J. Pappas Jr.

Some of my favourite tools:

Nextflow Python R bash

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Felipe Github Stats

Pinned

  1. ngs-preprocess ngs-preprocess Public

    A pipeline for preprocessing NGS data from Illumina, Nanopore and PacBio technologies

    Nextflow 28 4

  2. MpGAP MpGAP Public

    Multi-platform genome assembly pipeline for Illumina, Nanopore and PacBio reads

    Nextflow 52 10

  3. bacannot bacannot Public

    Generic but comprehensive pipeline for prokaryotic genome annotation and interrogation with interactive reports and shiny app.

    Nextflow 94 9

  4. gff-toolbox gff-toolbox Public

    Gff-toolbox is a toolbox of commands that enables one to get the gist of their GFF annotation files, as well as to analyse them in different ways.

    Python 7 1

  5. easy_circos easy_circos Public

    easy_circos is a simple conda package that aims on rapidly and easily creating minimal circos configurations templates based on input data.

    Shell 7 2

  6. KirstLab/asc_seurat KirstLab/asc_seurat Public

    R 24 9