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  • Davis, California

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Pinned

  1. metabolic-allele-classifiers metabolic-allele-classifiers Public

    A flux balance analysis machine learning classifier for microbial GWAS

    Jupyter Notebook 13 2

  2. microbial_AMR_ML microbial_AMR_ML Public

    Code repository for machine learning and computational analysis of large-scale microbial genomics data (https://rdcu.be/9rHj)

    Jupyter Notebook 18 9

  3. iEK1011_materials iEK1011_materials Public

    Repository for updated and standardized model of Mycobacterium tuberculosis H37Rv, iEK1011 (and the BiGGs quality iEK1008 model)

    Jupyter Notebook 3

  4. cobrascape cobrascape Public

    constraint-based modeling for allelic variation (COBRA for fitness landSCAPEs)

    Python 1