orthologr v0.4.2

orthologr version 0.4.2

New Function

• diamond(), set_diamond(), diamond_best() and diamond_rec() enable a massive speed-up in pairwise sequence alignment functionalities.

New Features

• a logo is now set for orthologr.
• DIAMOND2 is now used by default in dNdS() and divergence_stratigraphy() unless blast is specified (aligner = "blast").

orthologr v0.4.1

• divergence_stratigraphy() and divergence_map() now include the parameter n_quantile.

This is the first version to be released as requested by #43. For information on previous versions, please see the changelog on the package website.